When Gonard is making his "If space is time, then time is space," speech to Lily and Guano, a picture of a large black box and the earth appear in the background. This is most likely a reference to the Black Monolith from Stanley Kubrick's 2001: A Space Odyssey.
(Mikey trying to get someone to go to a movie with him)
Mikey: Doesn't anyone here want to go with me?
Dr. Igor: I won't go with you, but maybe I'll see you there.(Ominous music)
(Mikey and Mitsuki looking puzzled)
Dr. Igor:(embarrassed) I work part-time as an usher.
Mikey: Now we've got copies of all your files and all your poems.(clearing throat) 'The lonely man in the mailbox' by Agent F.
Agent F: Stop! That's private!
Mikey: Okay Mitsuki, I want answers. Who was that guy? Where'd you learn those moves? What did you get me for my birthday? Answer in any order you like.
Gonard: But what if space is time and what if time is space? And what if space is space?... Are you gonna finish that sandwich?
The title is a reference to the movie "LaFemme Nikita" about a felon giving a new identity as a top secret spy.