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As Finch and Root go on a seemingly random series of errands to save the Machine against Samaritan's onslaught, Dominic threatens to shoot Harper and Elias unless Reese puts him in contact with Finch.
The Machine sends the team two new Numbers: Elias and Dominic. Meanwhile, Finch and Root get a clue to Sam's whereabouts, and Control tries to learn the truth about Samaritan.
Reese sets himself to solve a case that Carter was never able to close.
Reese and Finch try to protect a software CEO whose behavior becomes erratic after a hacker attack reveals his secrets.
The team's new Number is Frankie Wells, a bounty hunter who refuses to give up on a target despite the threat to her life. Meanwhile, Finch links back up with Beth Bridges.
The team's new Number is a psychologist whose unorthodox technique for helping his patients find closure puts him at risk. Meanwhile, in the past Finch tries to deal with the trauma of losing his best friend Nathan.
Reese and Finch protect a street-savvy grifter who makes the mistake of stealing laundered money from Dominic. Meanwhile, Root infiltrates a software app company on the Machine's behalf.
Reese and Fusco help a transcriber at a software firm who is the team's new Number, while Claire contacts Finch and asks him for help against Decima.
Finch suspects that a fellow juror is trying to rig the proceedings in a murder trial. Meanwhile, Reese begins to open up to the department's therapist.
While Reese and Root look for Sam in an upstate New York town, Fusco helps out the newest Number with the help of a previous one.
Samaritan begins to withhold information from the ISA, raising Control's suspicions. Meanwhile, Root and Reese search for their missing teammate.
The team must go on a seeming suicide run to prevent the financial meldown that Samaritan has engineered.
To demonstrate its power to the Machine, Samaritan launches a massive effort to shut down all crime in NYC for 24 hours... and then unleash it worse than ever. Meanwhile, Finch and Reese try to keep up with the new influx of Numbers, and Root meets with her opposite number.
Reese and Finch receive a new Number: Elias, who Dominic wants dead. Meanwhile, Root rescues Sam from Martine but Sam doesn't want to be rescued, and threatens to go public if they don't let her help save Elias.
The team's new number is a police academy recruit: a loose cannon who is apparently working for the gangs. Meanwhile, Samaritan sends Martine to track down the woman who prevented it from obtaining the virus.
The team's new Number turns out to be an international jewel thief, and Sam has to get close to the man to find out if he's victim or perpetrator. Meanwhile, Finch recruits Root to help him undermine Samaritan's plans to distribute tablets to school children.
The team's new Number is a mild-mannered insurance agent who is pretending to be a police detective to investigate the supposed suicide of a co-worker's brother. Meanwhile, Finch is sent to a conference in Hong Kong and meets an attractive businesswoman specializing in computers.
While Finch, Sam, and Root try to protect a pollster who suspects that Samaritan rigged the elections, Reese is sidelined in therapy due to his high number of shootings during homicide cases.
The Brotherhood goes after two children who stole drug money from them, and Reese has to team up with a DEA agent to stop them. Meanwhile, Finch turns to Elias for help.
The team's new number is a professional wingman, and Fusco has to go undercover as a needy client while Reese deals with a demanding police captain. Meanwhile, Root takes Finch on a scavenger hunt for the Machine.
Reese involves Finch in his attempt to protect a new Number, a mathematics student who is playing a city-wide game. However, they soon discover that the game is much more than a simple scavenger hunt.
After several months of silence, the Machine sends a new Number to Reese and Sam... and Finch, who ignores the call. Meanwhile, Fusco gets a new partner and Elias receives an unexpected visitor.