The technique Michaelangelo uses to defeat Cyber-Shredder in the same technique Splinter used to defeat the Utrom Shredder in The Shredder Strikes, Part Two.
Donatello: Welcome to cyberspace. Every computer program and data network from the entire web has a manifestation here. From the biggest database to the smallest instant message.
April: It's amazing.
Raphael: Looks like it's open season on Purple Dragons tonight.
Casey: No kidding. I'm starting to lose count.
Raphael: Look down the side alley. They took down Hun, too.
Casey: Who could had done this?
Hun: I'm not afraid of you!
Cyber-Shredder: Then you are a fool.
Hun: Huh? You?! But... but that's impossible!
Cyber-Shredder: Nothing is impossible to me, worm!
Leonardo: It's over, Khan! Release the city!
Cyber-Shredder: It is not his to release.
Donatello: The Shredder?!
Michelangelo: He escaped out of cyberspace?!
Leonardo: But how?
Raphael: Who cares? Now we can put the hard on him for real!
Cyber-Shredder: I have long waited for this moment. Destroy them!
Villains: Cyber-Shredder, Khan, and the Foot Ninja